Basic Information
Locus ID:
jg8162
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Zc3h12a-like Ribonuclease NYN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 1332410 | 1338807 | - | jg8162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 63,303.70 Da | 36.88 | 75.36 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 307 | 534 | 3.1E-63 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 60 | 267 | 8.7E-66 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 68 | 535 | 2.4E-213 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 325 | 500 | 2.4E-213 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 563 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_011088868.1 | proteinaceous RNase P 2 [Sesamum indicum] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9U4V8 | ribonuclease P OS=Sesamum indicum OX=4182 GN=LOC105169999 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology