Basic Information
Locus ID:
jg8104
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 897459 | 900277 | - | jg8104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 31,984.03 Da | 40.62 | 97.47 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 60 | 163 | 5.7E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 272 | 4.83E-31 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 33 | 96 | 1.6E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 280 | 3.8E-28 | - |
| SMART | SM00219 | tyrkin_6 | 30 | 272 | 0.0011 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 281 | 11.835118 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22050.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011088974.1 | probable receptor-like protein kinase At1g49730 isoform X1 [Sesamum indicum] | 0 |
| Q9FX99 | Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana OX=3702 GN=At1g49730 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TYF2 | probable receptor-like protein kinase At1g49730 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105170071 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg8104 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_5736 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027745 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g171280 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003459 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl72715, Sgl76254 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000004865, gene:ENSEOMG00000037459 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7AG0005310 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30055280, pistato.v30063750 |
| Apiaceae | Apium graveolens | 1 | Ag11G04396 |
| Arecaceae | Cocos nucifera | 1 | scaffold000873G000060 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103715707 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.3375.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G14105 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G22050.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10015417m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g23140.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g010990.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1891 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl05G1881, Cgl05G1884, Cgl05G1891 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g04780 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g04660 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.560 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00026584 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb0G37994, Lb3G20272, Lb6G29646 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.276, BH03.354, CH03.427 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0556120, gene-QOZ80_7BG0587060 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0152330.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_042566 |
| Poaceae | Oryza coarctata | 2 | Oco13G001680, Oco14G001820 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g06570.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G038700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0303553 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G001270, Chr28G001130 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G458800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG033550, gene_TRIDC2BG038470 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G249300.2, TraesCS2B02G266100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb300310_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-35747 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g4756 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g11650 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_12_RagTag.494 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24247 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12703 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19750 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000027l.262 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018049 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5720 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11975 |
| Salicaceae | Populus euphratica | 3 | populus_peu02476, populus_peu35510, populus_peu35517 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132600662 |
| Solanaceae | Solanum chilense | 1 | SOLCI003294900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004928 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3659 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1307 |
| Zosteraceae | Zostera marina | 1 | Zosma02g24510.v3.1 |