Basic Information
Locus ID:
jg8098
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 807557 | 817726 | - | jg8098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 98,594.20 Da | 42.74 | 80.82 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 722 | 873 | 1.65792E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 280 | 872 | 7.7E-81 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 278 | 875 | 2.55E-108 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 264 | 508 | 1.9E-66 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 661 | 878 | 6.4E-56 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 152 | 236 | 7.8E-8 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 280 | 875 | 57.341274 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 281 | 296 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 818 | 835 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_011088987.1 | ubiquitin carboxyl-terminal hydrolase 8 [Sesamum indicum] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9TYG3 | Ubiquitin carboxyl-terminal hydrolase OS=Sesamum indicum OX=4182 GN=LOC105170079 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology