Basic Information
Locus ID:
jg7832
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Peptidyl-prolyl cis-trans isomerase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 13129548 | 13143107 | - | jg7832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.34 | 103,446.10 Da | 100.36 | 48.41 | -1.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 149 | 308 | 1.5E-36 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 138 | 313 | 6.28E-57 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 130 | 312 | 2.2E-65 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 146 | 310 | 33.959206 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 195 | 212 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 163 | 178 | 5.3E-17 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 271 | 286 | 5.3E-17 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 200 | 212 | 5.3E-17 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 243 | 258 | 5.3E-17 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 816 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 828 | 924 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 850 | 907 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 616 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32420.1 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_011084254.1 | peptidyl-prolyl cis-trans isomerase CYP95 [Sesamum indicum] | 0 |
| Q8RWY7 | Peptidyl-prolyl cis-trans isomerase CYP95 OS=Arabidopsis thaliana OX=3702 GN=CYP95 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G9H4U3 | HSP90 co-chaperone CPR7/Cyclophilin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14868 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology