Basic Information
Locus ID:
jg7779
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 12701644 | 12703936 | - | jg7779 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 43,696.92 Da | 35.42 | 85.04 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 174 | 277 | 5.3E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 150 | 356 | 5.2E-24 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 142 | 1.87E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 155 | 1.0E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 373 | 9.4E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 32 | 351 | 10.18144 | IPR000719 |
| Coils | Coil | Coil | 331 | 358 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.2 | - | 0 |
| RefSeq | XP_022880914.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Olea europaea var. sylvestris] | 0 |
| C0LGR9 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SZ97 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Sesamum indicum OX=4182 GN=LOC105160563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology