Basic Information
Locus ID:
jg7673
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 11796104 | 11800454 | + | jg7673 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 61,113.89 Da | 52.16 | 84.29 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 137 | 214 | 2.24447E-10 | - |
| Pfam | PF00651 | BTB/POZ domain | 140 | 230 | 6.0E-11 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 256 | 347 | 2.1E-12 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 140 | 229 | 6.28E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 430 | 542 | 3.33E-5 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 265 | 368 | 2.9E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 129 | 264 | 2.3E-14 | IPR011333 |
| SMART | SM00875 | BACK_2 | 246 | 348 | 1.1E-10 | IPR011705 |
| SMART | SM00225 | BTB_4 | 131 | 231 | 1.5E-6 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 128 | 200 | 9.599493 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_011073542.1 | BTB/POZ domain-containing protein POB1-like [Sesamum indicum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9SVS0 | BTB/POZ domain-containing protein POB1-like OS=Sesamum indicum OX=4182 GN=LOC105158466 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology