Basic Information
Locus ID:
jg7387
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 3803515 | 3806972 | + | jg7387 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 84,527.07 Da | 40.56 | 81.73 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 89 | 129 | 1.4E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 580 | 708 | 8.1E-11 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 376 | 395 | 0.52 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 314 | 349 | 0.016 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 10 | 44 | 1.1E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 418 | 5.1E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 581 | 716 | 6.83E-23 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 309 | 436 | 7.9E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 9 | 306 | 6.0E-79 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 553 | 724 | 7.0E-29 | - |
| SMART | SM00369 | LRR_typ_2 | 117 | 141 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 116 | 0.0084 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 374 | 398 | 27.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 376 | 398 | 7.226811 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 713 | 11.820985 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 447 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_012846104.1 | PREDICTED: probable receptor protein kinase TMK1 [Erythranthe guttata] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GC38 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24623 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology