Basic Information
Locus ID:
jg7360
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 3440452 | 3442440 | - | jg7360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 60,359.92 Da | 41.77 | 96.92 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 61 | 1.5E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 286 | 540 | 1.4E-27 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 540 | 4.21E-48 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 163 | 8.26E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 546 | 1.3E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 251 | 355 | 6.1E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 176 | 8.3E-36 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 282 | 544 | 24.612253 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02880.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_022882042.1 | probable inactive receptor kinase RLK902 [Olea europaea var. sylvestris] | 0 |
| Q9M8T0 | Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana OX=3702 GN=At3g02880 PE=1 SV=1 | 0 | |
| TrEMBL | A0A830BNH7 | Probable inactive receptor kinase rlk902 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_000498500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology