Basic Information
Locus ID:
jg7316
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 2957676 | 2966024 | - | jg7316 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 195,209.41 Da | 52.39 | 76.71 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1470 | 1733 | 1.13417E-150 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 365 | 666 | 2.87692E-94 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1509 | 1676 | 1.8E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 378 | 662 | 1.5E-24 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1466 | 1733 | 1.31E-81 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 431 | 560 | 4.45E-26 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1445 | 1590 | 7.5E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 430 | 576 | 1.2E-35 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1591 | 1734 | 2.4E-42 | - |
| SMART | SM00330 | PIPK_2 | 1436 | 1734 | 5.4E-122 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 37 | 106 | 8.90941 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1413 | 1733 | 58.230614 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 806 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_011070636.1 | LOW QUALITY PROTEIN: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Sesamum indicum] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9SNE9 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Sesamum indicum OX=4182 GN=LOC105156256 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology