Basic Information
Locus ID:
jg7029
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 593734 | 597067 | - | jg7029 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 73,517.16 Da | 34.27 | 98.46 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 162 | 221 | 8.2E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 340 | 609 | 1.5E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 71 | 110 | 2.0E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 612 | 3.69E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 234 | 7.94E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 70 | 252 | 7.3E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 307 | 414 | 1.6E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 632 | 2.0E-64 | - |
| SMART | SM00220 | serkin_6 | 338 | 611 | 4.7E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 338 | 616 | 36.400009 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 162 | 184 | 7.134402 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 461 | 473 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 344 | 366 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_020551830.1 | protein NSP-INTERACTING KINASE 3 [Sesamum indicum] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8M8V5Y7 | protein NSP-INTERACTING KINASE 3 OS=Sesamum indicum OX=4182 GN=LOC105168278 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology