Basic Information
Locus ID:
jg6727
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ScioBoG_12601_HRSCAF_12652 | 305 | 1388 | - | jg6727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 23,748.68 Da | 30.86 | 90.88 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 3 | 130 | 6.6E-48 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 188 | 217 | 4.8E-87 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 2 | 187 | 4.8E-87 | IPR011990 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.2 | - | 0 |
| RefSeq | XP_011088868.1 | proteinaceous RNase P 2 [Sesamum indicum] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9U4V8 | ribonuclease P OS=Sesamum indicum OX=4182 GN=LOC105169999 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology