Basic Information
Locus ID:
jg6488
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 12188986 | 12198552 | + | jg6488 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 188,986.38 Da | 43.30 | 79.81 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1271 | 1531 | 4.26758E-128 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 218 | 484 | 8.87652E-93 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1311 | 1476 | 1.1E-32 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 222 | 473 | 9.2E-21 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1477 | 1529 | 1.3E-8 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 283 | 451 | 3.14E-23 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1247 | 1531 | 3.92E-76 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1244 | 1391 | 7.9E-35 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 283 | 451 | 1.6E-30 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1393 | 1532 | 4.1E-40 | - |
| SMART | SM00330 | PIPK_2 | 1254 | 1532 | 7.4E-80 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1213 | 1531 | 54.779099 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1562 | 1588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1564 | 1588 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_011074908.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Sesamum indicum] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A6I9T3N2 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Sesamum indicum OX=4182 GN=LOC105159518 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology