Basic Information
Locus ID:
jg6392
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 11605085 | 11607196 | - | jg6392 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 62,913.27 Da | 54.47 | 79.58 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 28 | 269 | 2.35128E-75 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 29 | 267 | 3.2E-54 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 462 | 9.5E-12 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 26 | 268 | 3.4E-54 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 457 | 532 | 7.93E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 338 | 461 | 8.7E-18 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 16 | 279 | 1.6E-59 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 385 | 407 | - | IPR017441 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_011075009.1 | L-type lectin-domain containing receptor kinase S.6 [Sesamum indicum] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T3W7 | L-type lectin-domain containing receptor kinase S.6 OS=Sesamum indicum OX=4182 GN=LOC105159594 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology