Basic Information
Locus ID:
jg6377
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 11503758 | 11507596 | - | jg6377 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 32,878.34 Da | 41.42 | 81.40 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 168 | 286 | 4.4E-21 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 81 | 287 | 1.6E-81 | - |
| SMART | SM00702 | p4hc | 88 | 286 | 1.5E-67 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 164 | 287 | 12.213551 | IPR005123 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20270.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_022880030.1 | probable prolyl 4-hydroxylase 3 isoform X1 [Olea europaea var. sylvestris] | 0 |
| Q9LN20 | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8S0USE5 | Probable prolyl 4-hydroxylase 3 OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A119511 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology