Basic Information
Locus ID:
jg6363
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 11432491 | 11435541 | - | jg6363 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 103,652.38 Da | 30.58 | 103.91 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 67 | 3.0E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 457 | 515 | 2.9E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 663 | 935 | 4.8E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 265 | 324 | 1.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 519 | 559 | 4.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 245 | 561 | 9.42E-60 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 329 | 5.96E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 654 | 935 | 9.04E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 639 | 736 | 2.4E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 737 | 941 | 1.6E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 187 | 1.3E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 520 | 7.2E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 521 | 594 | 3.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 265 | 1.8E-15 | IPR032675 |
| SMART | SM00220 | serkin_6 | 660 | 935 | 2.8E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 287 | 310 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 141 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 522 | 546 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 431 | 455 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 335 | 359 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 478 | 502 | 21.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 660 | 936 | 38.562511 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 504 | 526 | 7.196008 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 781 | 793 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 290 | 303 | 3.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 522 | 535 | 3.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_011074693.1 | receptor protein kinase CLAVATA1-like [Sesamum indicum] | 0 |
| Q8GRU6 | Leucine-rich repeat receptor-like kinase protein HAR1 OS=Lotus japonicus OX=34305 GN=HAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SVR5 | receptor protein kinase CLAVATA1-like OS=Sesamum indicum OX=4182 GN=LOC105159353 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology