Basic Information
Locus ID:
jg6145
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 9565434 | 9574220 | + | jg6145 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 105,846.06 Da | 40.21 | 84.06 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 668 | 909 | 2.14399E-126 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 283 | 491 | 1.0E-72 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 662 | 911 | 8.3E-65 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 641 | 911 | 4.45E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 741 | 921 | 7.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 655 | 739 | 6.6E-36 | - |
| SMART | SM00220 | serkin_6 | 662 | 923 | 4.3E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 662 | 923 | 43.989967 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 668 | 689 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 783 | 795 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 843 | 865 | 2.1E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 887 | 909 | 2.1E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 736 | 749 | 2.1E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 777 | 795 | 2.1E-10 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_051150641.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Andrographis paniculata] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SVH2 | serine/threonine-protein kinase CTR1 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105159040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology