Basic Information
Locus ID:
jg5914
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 6222393 | 6225895 | + | jg5914 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 59,591.31 Da | 36.42 | 82.80 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 55 | 313 | 7.39603E-129 | - |
| CDD | cd00051 | EFh | 434 | 496 | 5.18671E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 314 | 4.1E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 432 | 495 | 1.0E-11 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 374 | 424 | 1.3E-5 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 353 | 495 | 2.93E-38 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 338 | 8.9E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 141 | 1.1E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 323 | 498 | 7.0E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 322 | 7.7E-57 | - |
| SMART | SM00054 | efh_1 | 470 | 498 | 4.2E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 361 | 389 | 0.023 | IPR002048 |
| SMART | SM00054 | efh_1 | 433 | 461 | 0.07 | IPR002048 |
| SMART | SM00220 | serkin_6 | 56 | 314 | 4.1E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 397 | 425 | 1.5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 466 | 501 | 11.723866 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 8.404312 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 357 | 392 | 12.365459 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 12.839682 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 314 | 46.986374 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 442 | 454 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 85 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 370 | 382 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 479 | 491 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_011073922.1 | calcium-dependent protein kinase 24-like [Sesamum indicum] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T185 | calcium-dependent protein kinase 24-like OS=Sesamum indicum OX=4182 GN=LOC105158765 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology