Basic Information
Locus ID:
jg5854
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 3574800 | 3587597 | + | jg5854 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 120,820.97 Da | 54.26 | 71.00 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 164 | 257 | 1.18031E-46 | - |
| CDD | cd13999 | STKc_MAP3K-like | 809 | 1066 | 4.50446E-111 | - |
| Pfam | PF00564 | PB1 domain | 176 | 259 | 2.4E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 806 | 1066 | 2.6E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 176 | 264 | 5.1E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 789 | 1066 | 9.7E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 796 | 889 | 7.3E-26 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 179 | 260 | 1.7E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 890 | 1079 | 9.4E-52 | - |
| SMART | SM00220 | serkin_6 | 803 | 1069 | 1.3E-58 | IPR000719 |
| SMART | SM00666 | PB1_new | 175 | 260 | 2.3E-31 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 803 | 1069 | 40.696747 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 928 | 940 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 809 | 834 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 993 | 1015 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 885 | 898 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1037 | 1059 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 922 | 940 | 1.7E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 727 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 769 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 719 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 481 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_051129147.1 | uncharacterized protein LOC127250051 isoform X1 [Andrographis paniculata] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9HDF0 | Tyrosine kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11812 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology