Basic Information
Locus ID:
jg581
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ScioBoG_11176_HRSCAF_11224 | 851 | 2702 | - | jg581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 34,186.16 Da | 45.39 | 85.26 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 162 | 266 | 8.7E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 99 | 283 | 1.57E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 137 | 286 | 4.2E-30 | - |
| SMART | SM00219 | tyrkin_6 | 112 | 268 | 0.0022 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 283 | 9.093122 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 81 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 0 |
| RefSeq | XP_028107755.1 | cysteine-rich receptor-like protein kinase 10 [Camellia sinensis] | 0 |
| Q9SXB8 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5B6YY24 | Cysteine-rich receptor-like protein kinase 10 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_005999 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg21923, jg21925, jg21927, jg581 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1555 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1737 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.581 |
| Salicaceae | Populus euphratica | 1 | populus_peu10241 |