Basic Information
Locus ID:
jg5735
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 1369931 | 1372351 | + | jg5735 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 65,918.82 Da | 47.90 | 77.37 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12202 | Oxidative-stress-responsive kinase 1 C-terminal domain | 272 | 326 | 2.4E-6 | IPR024678 |
| Pfam | PF00069 | Protein kinase domain | 5 | 176 | 1.5E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 177 | 4.05E-48 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 251 | 335 | 7.6E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 182 | 3.1E-50 | - |
| SMART | SM00220 | serkin_6 | 1 | 176 | 5.1E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 176 | 30.548534 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 43 | 55 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 559 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04910.2 | with no lysine (K) kinase 1. Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm. | 0 |
| RefSeq | XP_022878813.1 | probable serine/threonine-protein kinase WNK9 isoform X2 [Olea europaea var. sylvestris] | 0 |
| Q9CAV6 | Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana OX=3702 GN=WNK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9HQN8 | non-specific serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07493 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg12561, jg27893, jg5735 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_10071, gene_2576 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah006051, Ah037591 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g081870 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg16836, Sbi_jg5166, Sbi_jg61369, Sbi_jg6957 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg123, Seu_jg13118 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00003657, GOSA_00003658, GOSA_00008227 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl00127, Sgl00296, Sgl05352, Sgl24811, Sgl29959 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000008852, gene:ENSEOMG00000017685 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.4AG0010210, CQ.Regalona.r1.4BG0010420 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30091690, pistato.v30236820 |
| Apiaceae | Apium graveolens | 6 | Ag1G01868, Ag5G02498, Ag6G01922, Ag6G01951, Ag8G01602 ... |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G014450, contig69553323G000010 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103717647, gene-LOC103723763, gene-LOC120108451 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_03.1608.V1.1, AsparagusV1_07.3719.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri3G26261, Ftri4G07256 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT3G04910.1, AT3G22420.2, AT5G28080.2 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10004283m.g.v1.0, Thhalv10020195m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp2g20250.v2.2, Sp3g03720.v2.2, Sp3g20180.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g040210.2N, BniB01g058680.2N, BniB02g079430.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq06G2349, Ceq09G1345 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl06G2473, Cgl09G1435 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g11720 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g37500 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-12071 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG03.2292, evm.TU.LG11.1042 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00021298, Pov_00025983 |
| Plumbaginaceae | Limonium bicolor | 6 | Lb3G15925, Lb3G15926, Lb4G21744, Lb4G24285, Lb6G29641 ... |
| Poaceae | Echinochloa crus-galli | 6 | AH03.3399, AH03.433, BH03.3652, BH03.529, CH03.3845 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_7AG0558520, gene-QOZ80_7AG0573860 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0132510.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_040153 |
| Poaceae | Oryza coarctata | 3 | Oco13G010620, Oco14G003010, Oco14G011330 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g08750.1, LOC_Os07g38530.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G058000, gene-BS78_02G323000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0303730, Pt_Chr0304508 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr19G003880, Chr24G000210, Chr24G010820, Chr27G013390 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G375300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG025210, gene_TRIDC2BG029650 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G195900.2, TraesCS2B02G223600.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb107400_P001, Zm00001eb301720_P002 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10542, nbis-gene-26789 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g5399, Zma_g6104 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG06.1742, evm.TU.LG08.535, evm.TU.LG11.1094 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g04900 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_1_RagTag.199, evm.TU.Scaffold_2_RagTag.1966 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-1476, nbisL1-mrna-3380, nbisL1-mrna-8034 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-11631, nbisL1-mrna-49, nbisL1-mrna-6490 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-13759, nbisL1-mrna-5258, nbisL1-mrna-6174 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000009l.111, evm.TU.utg000012l.137 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00005737, Maker00010946, Maker00012903 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-12926, nbisL1-mrna-6353, nbisL1-mrna-7821 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-16227, nbisL1-mrna-185, nbisL1-mrna-2124 |
| Salicaceae | Populus euphratica | 4 | populus_peu07378, populus_peu13541, populus_peu15870 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132609213, gene-LOC132645250 |
| Solanaceae | Solanum chilense | 2 | SOLCI001721500, SOLCI006482400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107031245, gene-LOC107031313 |
| Tamaricaceae | Reaumuria soongarica | 3 | STRG.32051_chr09_-, gene_12003, gene_7926 |
| Tamaricaceae | Tamarix chinensis | 3 | TC02G0149, TC05G2294, TC06G0850 |
| Zosteraceae | Zostera marina | 2 | Zosma04g10340.v3.1, Zosma06g23130.v3.1 |