Basic Information
Locus ID:
jg5693
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 933160 | 938571 | + | jg5693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 61,635.27 Da | 34.71 | 106.87 | 0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 28 | 441 | 7.3E-58 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 144 | 195 | 7.9E-14 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 151 | 161 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 97 | 111 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 83 | 94 | 2.0E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 112 | 120 | 2.0E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_011090859.1 | sodium/hydrogen exchanger 1 [Sesamum indicum] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9UA52 | Sodium/hydrogen exchanger OS=Sesamum indicum OX=4182 GN=LOC105171439 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology