Basic Information
Locus ID:
jg5619
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 308108 | 311731 | + | jg5619 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 59,522.28 Da | 43.30 | 88.06 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 356 | 489 | 9.4E-64 | IPR024746 |
| Pfam | PF12899 | Alkaline and neutral invertase | 150 | 300 | 1.7E-56 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 364 | 481 | 7.94E-21 | IPR008928 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 154 | 300 | 7.37E-15 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 383 | 485 | 2.6E-6 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 128 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06500.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_011071359.1 | alkaline/neutral invertase A, mitochondrial [Sesamum indicum] | 0 |
| B9DFA8 | Alkaline/neutral invertase C, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=INVC PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SQ70 | Alkaline/neutral invertase OS=Sesamum indicum OX=4182 GN=LOC105156827 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology