Basic Information
Locus ID:
jg5553
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14411285 | 14414609 | + | jg5553 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 54,486.21 Da | 36.77 | 82.56 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 218 | 261 | 1.1E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 217 | 262 | 6.54E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 378 | 2.5E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 212 | 259 | 2.1E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 212 | 259 | 10.080346 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_011071184.1 | F-box protein SKIP14-like [Sesamum indicum] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9I9S8 | F-box domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00859 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology