Basic Information
Locus ID:
jg5506
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14098488 | 14102453 | - | jg5506 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 80,227.78 Da | 37.81 | 84.99 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 401 | 670 | 4.74375E-90 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 222 | 314 | 6.6E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 120 | 205 | 1.1E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 396 | 600 | 4.3E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 685 | 9.44E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 471 | 676 | 1.4E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 355 | 470 | 6.4E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 105 | 207 | 3.3E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 217 | 317 | 1.1E-14 | IPR038408 |
| SMART | SM00220 | serkin_6 | 395 | 690 | 3.3E-31 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 212 | 317 | 14.796107 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 106 | 207 | 16.407381 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 395 | 690 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 401 | 423 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 516 | 528 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_051144808.1 | cysteine-rich receptor-like protein kinase 2 [Andrographis paniculata] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SNG3 | cysteine-rich receptor-like protein kinase 2 OS=Sesamum indicum OX=4182 GN=LOC105156626 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology