Basic Information
Locus ID:
jg5143
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 11246763 | 11248700 | + | jg5143 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 68,186.65 Da | 49.78 | 95.10 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 2.8E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 352 | 603 | 1.1E-22 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 604 | 1.57E-44 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 208 | 7.65E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 240 | 5.9E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 421 | 4.3E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 613 | 4.3E-45 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 163 | 185 | 7.44243 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 607 | 22.223608 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_022882042.1 | probable inactive receptor kinase RLK902 [Olea europaea var. sylvestris] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A830BNH7 | Probable inactive receptor kinase rlk902 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_000498500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology