Basic Information
Locus ID:
jg5109
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 10852407 | 10855736 | - | jg5109 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 83,178.50 Da | 39.68 | 86.24 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 57 | 1.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 383 | 424 | 5.7E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 108 | 160 | 1.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 329 | 361 | 0.0014 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 563 | 695 | 1.8E-13 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 426 | 6.8E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 559 | 720 | 8.76E-27 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 325 | 449 | 5.3E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 321 | 1.1E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 550 | 711 | 2.2E-33 | - |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 0.015 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 154 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 254 | 278 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 476 | 701 | 6.8E-4 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 411 | 433 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 70.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 327 | 701 | 11.990592 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 389 | 410 | 7.750458 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 108 | 129 | 7.1036 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 411 | 424 | 7.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 390 | 403 | 7.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 774 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 470 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_012846104.1 | PREDICTED: probable receptor protein kinase TMK1 [Erythranthe guttata] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GC38 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24623 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology