Basic Information
Locus ID:
jg4751
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 2250967 | 2258090 | - | jg4751 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 65,533.43 Da | 50.70 | 80.24 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 136 | 215 | 6.69203E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 136 | 229 | 2.2E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 255 | 348 | 2.1E-11 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 136 | 229 | 1.02E-12 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 263 | 369 | 1.3E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 134 | 252 | 4.0E-17 | IPR011333 |
| SMART | SM00875 | BACK_2 | 247 | 349 | 1.2E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 132 | 232 | 3.7E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 136 | 201 | 11.977923 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_011073542.1 | BTB/POZ domain-containing protein POB1-like [Sesamum indicum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G9H7K0 | BTB domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14101 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology