halophFGD

Basic Information

Locus ID: jg4535

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: Protein NRT1 PTR FAMILY

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	559095	561538	-	jg4535

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.22	63,560.26 Da	52.37	97.52	0.31

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd17416	MFS_NPF1_2	30	561	0.0	-
Pfam	PF00854	POT family	95	526	1.4E-68	IPR000109
SUPERFAMILY	SSF103473	MFS general substrate transporter	41	115	5.23E-6	IPR036259
SUPERFAMILY	SSF103473	MFS general substrate transporter	139	559	3.66E-14	IPR036259
Gene3D	G3DSA:1.20.1250.20	MFS general substrate transporter like domains	6	569	1.5E-149	IPR036259
ProSitePatterns	PS01022	PTR2 family proton/oligopeptide symporters signature 1.	84	108	-	IPR018456
MobiDBLite	mobidb-lite	consensus disorder prediction	1	20	-	-

Gene Ontology

Biological Process:

GO:0006857 (oligopeptide transport) GO:0055085 (transmembrane transport)

Molecular Function:

GO:0022857 (transmembrane transporter activity)

Cellular Component:

GO:0016020 (membrane)

KEGG Pathway

KO Term:

K14638 (solute carrier family 15 (peptide/histidine transporter), member 3/4)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G52190.1	Major facilitator superfamily protein.
RefSeq	XP_011090875.1	protein NRT1/ PTR FAMILY 1.2 isoform X1 [Sesamum indicum]
Swiss-Prot	Q9M817	Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana OX=3702 GN=NPF1.2 PE=1 SV=1
TrEMBL	A0A6I9UA72	protein NRT1/ PTR FAMILY 1.2 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105171421 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg18135, jg36725, jg4534, jg4535
Aizoaceae	Mesembryanthemum crystallinum	2	gene_13236, gene_26122
Amaranthaceae	Atriplex hortensis	9	Ah006097, Ah010871, Ah010872, Ah017560, Ah022731, Ah022732 ... Ah034956, Ah034957, Ah034958
Amaranthaceae	Beta vulgaris	5	BVRB_2g032110, BVRB_2g032120, BVRB_2g032160, BVRB_2g032180 ... BVRB_9g221330
Amaranthaceae	Salicornia bigelovii	12	Sbi_jg11376, Sbi_jg20967, Sbi_jg20970, Sbi_jg20973 ... Sbi_jg20974, Sbi_jg22806, Sbi_jg22808, Sbi_jg22812, Sbi_jg22814, Sbi_jg40103, Sbi_jg46327, Sbi_jg50010
Amaranthaceae	Salicornia europaea	6	Seu_jg16678, Seu_jg16679, Seu_jg16681, Seu_jg16686 ... Seu_jg1671, Seu_jg20656
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00005322, GOSA_00011297, GOSA_00018211
Amaranthaceae	Suaeda glauca	6	Sgl46280, Sgl50992, Sgl55806, Sgl61013, Sgl62244, Sgl66791
Amaranthaceae	Chenopodium album	15	gene:ENSEOMG00000008416, gene:ENSEOMG00000012328 ... gene:ENSEOMG00000014931, gene:ENSEOMG00000015224, gene:ENSEOMG00000017459, gene:ENSEOMG00000018836, gene:ENSEOMG00000019804, gene:ENSEOMG00000030175, gene:ENSEOMG00000035709, gene:ENSEOMG00000040000, gene:ENSEOMG00000045907, gene:ENSEOMG00000047847, gene:ENSEOMG00000049732, gene:ENSEOMG00000050012, gene:ENSEOMG00000051427
Amaranthaceae	Chenopodium quinoa	9	CQ.Regalona.r1.1AG0001230, CQ.Regalona.r1.2AG0015780 ... CQ.Regalona.r1.2BG0017780, CQ.Regalona.r1.2BG0027300, CQ.Regalona.r1.4AG0010480, CQ.Regalona.r1.7BG0011590, CQ.Regalona.r1.8AG0002010, CQ.Regalona.r1.8BG0001980, CQ.Regalona.r1.9AG0013080
Anacardiaceae	Pistacia vera	4	pistato.v30124140, pistato.v30124950, pistato.v30253650 ... pistato.v30256770
Apiaceae	Apium graveolens	17	Ag1G01206, Ag4G00151, Ag4G00152, Ag5G00860, Ag5G01886 ... Ag6G01302, Ag6G01303, Ag7G00307, Ag7G00308, Ag7G00309, Ag7G00310, Ag8G00224, Ag9G01131, Ag9G01133, Ag9G01134, Ag9G01135, AgUnG00040
Arecaceae	Cocos nucifera	3	COCNU_06G005370, COCNU_14G003650, scaffold023260G000010
Arecaceae	Phoenix dactylifera	1	gene-LOC103709533
Asparagaceae	Asparagus officinalis	2	AsparagusV1_05.1916.V1.1, AsparagusV1_05.1917.V1.1
Asteraceae	Flaveria trinervia	7	Ftri10G16436, Ftri12G12696, Ftri12G24650, Ftri15G04492 ... Ftri18G20904, Ftri1G27918, FtriNA00819
Brassicaceae	Arabidopsis thaliana	3	AT1G52190.1, AT3G16180.1, AT5G11570.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10011325m.g.v1.0, Thhalv10020365m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp1g38740.v2.2, Sp3g14550.v2.2
Brassicaceae	Brassica nigra	3	BniB01g048730.2N, BniB04g057670.2N, BniB07g053550.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq04G2097, Ceq05G0311, Ceq06G1515
Casuarinaceae	Casuarina glauca	4	Cgl04G2290, Cgl06G1570, Cgl06G1571, Cgl06G1572
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-765
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.325, evm.TU.LG07.1110
Plantaginaceae	Plantago ovata	5	Pov_00003862, Pov_00013633, Pov_00013669, Pov_00022690 ... Pov_00025691
Plumbaginaceae	Limonium bicolor	2	Lb2G08494, Lb2G15472
Poaceae	Echinochloa crus-galli	6	AH02.3343, AH02.3344, BH02.3624, BH02.3625, CH02.3161 ... CH02.3164
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_1AG0034090, gene-QOZ80_1AG0034100 ... gene-QOZ80_1BG0084150, gene-QOZ80_1BG0084160
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.3HG0290590.1, HORVU.MOREX.r3.3HG0290630.1
Poaceae	Lolium multiflorum	2	gene-QYE76_055099, gene-QYE76_055101
Poaceae	Oryza coarctata	3	Oco01G020880, Oco02G021440, Oco02G021450
Poaceae	Oryza sativa	2	LOC_Os01g55600.1, LOC_Os01g55610.1
Poaceae	Paspalum vaginatum	2	gene-BS78_03G284300, gene-BS78_03G284400
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0500372, Pt_Chr0602705
Poaceae	Sporobolus alterniflorus	12	Chr01G010090, Chr02G008930, Chr02G008940, Chr02G008950 ... Chr02G008960, Chr03G016770, Chr05G024520, Chr05G024530, Chr05G024540, Chr05G024550, Chr05G024560, Chr12G026780
Poaceae	Thinopyrum elongatum	2	Tel3E01G491700, Tel3E01G492000
Poaceae	Triticum dicoccoides	5	gene_TRIDC3AG044030, gene_TRIDC3AG044040 ... gene_TRIDC3AG044050, gene_TRIDC3BG050000, gene_TRIDC3BG050010
Poaceae	Triticum aestivum	6	TraesCS3A02G304400.1, TraesCS3A02G304500.1 ... TraesCS3B02G332000.1, TraesCS3B02G332100.1, TraesCS3D02G297400.1, TraesCS3D02G297600.1
Poaceae	Zea mays	2	Zm00001eb152390_P001, Zm00001eb152400_P001
Poaceae	Zoysia japonica	3	nbis-gene-31142, nbis-gene-31143, nbis-gene-48769
Poaceae	Zoysia macrostachya	2	Zma_g11205, Zma_g11206
Portulacaceae	Portulaca oleracea	11	evm.TU.LG07.1675, evm.TU.LG07.670, evm.TU.LG07.671 ... evm.TU.LG07.674, evm.TU.LG07.675, evm.TU.LG08.1649, evm.TU.LG15.1542, evm.TU.LG15.267, evm.TU.LG15.268, evm.TU.LG15.271, evm.TU.LG22.541
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_10_RagTag.436
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-13100, nbisL1-mrna-13713, nbisL1-mrna-25644
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-6586
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-16829
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000033l.293
Rhizophoraceae	Kandelia obovata	1	Maker00014911
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-18357
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-8274
Salicaceae	Populus euphratica	13	populus_peu02673, populus_peu02720, populus_peu04894 ... populus_peu04895, populus_peu04896, populus_peu04897, populus_peu04898, populus_peu04899, populus_peu04900, populus_peu04902, populus_peu04903, populus_peu12761, populus_peu30153
Solanaceae	Lycium barbarum	13	gene-LOC132601903, gene-LOC132601904, gene-LOC132603689 ... gene-LOC132604207, gene-LOC132604208, gene-LOC132604210, gene-LOC132604211, gene-LOC132633379, gene-LOC132636803, gene-LOC132641398, gene-LOC132641399, gene-LOC132642690, gene-LOC132642691
Solanaceae	Solanum chilense	15	SOLCI000568900, SOLCI001760800, SOLCI002063400 ... SOLCI004066000, SOLCI004066100, SOLCI005619200, SOLCI007108800, SOLCI007241300, SOLCI007241400, SOLCI007241700, SOLCI007242000, SOLCI007242100, SOLCI007242200, SOLCI007242300, SOLCI007307200
Solanaceae	Solanum pennellii	18	gene-LOC107005491, gene-LOC107005915, gene-LOC107012272 ... gene-LOC107015096, gene-LOC107015114, gene-LOC107015115, gene-LOC107018238, gene-LOC107018446, gene-LOC107018741, gene-LOC107019137, gene-LOC107019153, gene-LOC107019160, gene-LOC107020017, gene-LOC107020329, gene-LOC107020330, gene-LOC107020331, gene-LOC107027059, gene-LOC114073829
Tamaricaceae	Reaumuria soongarica	2	STRG.19044_chr07_+, gene_3138
Tamaricaceae	Tamarix chinensis	1	TC08G1991