Basic Information
Locus ID:
jg4474
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 26842 | 29175 | + | jg4474 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 36,874.06 Da | 43.03 | 84.35 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 58 | 237 | 5.2E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 237 | 1.66E-31 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 25 | 130 | 2.2E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 241 | 1.0E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 324 | 18.02581 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011076339.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Sesamum indicum] | 0 |
| C0LGR9 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SZ97 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Sesamum indicum OX=4182 GN=LOC105160563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology