Basic Information
Locus ID:
jg4240
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 14653952 | 14664750 | + | jg4240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 123,682.48 Da | 52.48 | 97.27 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 248 | 1030 | 3.74E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 770 | 875 | 6.9E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 161 | 259 | 1.2E-5 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 661 | 769 | 4.9E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 442 | 1.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 446 | 660 | 1.3E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 152 | 1.3E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 876 | 1050 | 9.9E-11 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1050 | 1088 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1057 | 1072 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15890.2 | - | 0 |
| RefSeq | XP_051150637.1 | probable disease resistance protein At4g27220 [Andrographis paniculata] | 0 |
| Q9LMP6 | Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana OX=3702 GN=At1g15890 PE=3 SV=2 | 0 | |
| TrEMBL | A0A1C9TCM9 | Tsw OS=Capsicum chinense OX=80379 GN=Tsw PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology