Basic Information
Locus ID:
jg41083
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ScioBoG_98961_HRSCAF_99168 | 646 | 947 | + | jg41083 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 10,771.35 Da | 35.45 | 121.11 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 10 | 92 | 1.87E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 98 | 1.0E-19 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65380.1 | Leucine-rich repeat (LRR) family protein. Receptor-like protein containing leucine-rich repeats. Regulates both meristem and organ development in Arabidopsis. | 0 |
| RefSeq | XP_031105092.1 | receptor-like protein 14 [Ipomoea triloba] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg41083 |
| Apiaceae | Apium graveolens | 1 | Ag7G02197 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2182.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G30055 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0059, Ceq01G0127 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013970 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G007550 |
| Poaceae | Zea mays | 2 | Zm00001eb046230_P001, Zm00001eb227890_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24014 |