Basic Information
Locus ID:
jg40510
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Alpha mannosidase, middle domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 13907901 | 13925738 | - | jg40510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 115,458.81 Da | 37.43 | 86.49 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 42 | 317 | 4.49887E-179 | - |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 607 | 821 | 9.2E-49 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 903 | 1010 | 5.2E-11 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 43 | 354 | 1.5E-96 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 359 | 451 | 1.7E-19 | IPR015341 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 458 | 1013 | 1.33E-143 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 358 | 452 | 2.81E-27 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 31 | 355 | 1.28E-112 | IPR011330 |
| Gene3D | G3DSA:2.60.40.1180 | - | 478 | 604 | 1.4E-26 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 402 | 457 | 1.7E-21 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 605 | 869 | 5.9E-96 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 323 | 401 | 1.6E-29 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 42 | 322 | 2.0E-123 | IPR027291 |
| Gene3D | G3DSA:2.60.40.1360 | - | 888 | 1018 | 7.7E-35 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 359 | 433 | 4.5E-21 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_051118479.1 | alpha-mannosidase At3g26720-like [Andrographis paniculata] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9I390 | Alpha-mannosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03046 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology