Basic Information
Locus ID:
jg40402
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 13226311 | 13229081 | + | jg40402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 41,843.80 Da | 47.74 | 73.74 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 39 | 179 | 8.7E-20 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 23 | 198 | 6.8E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 48 | 202 | 5.7E-27 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 38 | 198 | 27.82456 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14490.2 | - | 0 |
| RefSeq | XP_011097382.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Sesamum indicum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GBK2 | NAC domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24833 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology