Basic Information
Locus ID:
jg40386
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 13112921 | 13115743 | + | jg40386 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 67,309.85 Da | 43.38 | 79.53 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 240 | 2.5E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 62 | 133 | 8.5E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 367 | 539 | 4.7E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 561 | 9.31E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 40 | 135 | 5.5E-14 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 351 | 552 | 7.3E-59 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 147 | 243 | 4.7E-14 | IPR038408 |
| SMART | SM00220 | serkin_6 | 324 | 558 | 1.3E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 238 | 558 | 23.297791 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 144 | 243 | 15.040514 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 135 | 15.040514 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 395 | 407 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 602 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_011098445.1 | cysteine-rich receptor-like protein kinase 42 [Sesamum indicum] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9UK64 | cysteine-rich receptor-like protein kinase 42 OS=Sesamum indicum OX=4182 GN=LOC105177109 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology