Basic Information
Locus ID:
jg4033
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 12379189 | 12392023 | + | jg4033 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 77,951.08 Da | 36.15 | 100.43 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 302 | 568 | 1.5E-39 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 180 | 1.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 6.3E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 200 | 7.94E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 280 | 569 | 3.24E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 375 | 5.9E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 211 | 2.4E-51 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 586 | 7.9E-59 | - |
| SMART | SM00220 | serkin_6 | 299 | 568 | 3.4E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 584 | 34.859402 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 418 | 430 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 167 | 180 | 2.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 122 | 135 | 2.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011069822.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Sesamum indicum] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SL98 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Sesamum indicum OX=4182 GN=LOC105155622 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology