Basic Information
Locus ID:
jg40284
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 12441271 | 12442192 | + | jg40284 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 18,451.24 Da | 52.21 | 89.46 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 104 | 7.87E-10 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 71 | 1.7E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_042020426.1 | serine/threonine-protein kinase PBL34-like [Salvia splendens] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6PRA3 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_06892 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg40284 |
| Anacardiaceae | Pistacia vera | 5 | pistato.v30193930, pistato.v30194990, pistato.v30210420 ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000346 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr18G015950 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-13540, nbis-gene-29654 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21449 |