Basic Information
Locus ID:
jg40197
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 11857394 | 11860768 | - | jg40197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 121,734.25 Da | 30.76 | 102.53 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 851 | 1119 | 4.47804E-89 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 256 | 277 | 0.64 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 848 | 1046 | 1.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 613 | 672 | 2.0E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 77 | 3.8E-11 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 159 | 181 | 0.18 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 183 | 205 | 0.036 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 337 | 1.87E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 355 | 725 | 4.25E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 829 | 1116 | 4.59E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 114 | 252 | 7.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 496 | 750 | 4.9E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 104 | 1.5E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 253 | 342 | 1.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 353 | 478 | 4.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 808 | 920 | 4.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 921 | 1120 | 4.1E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 683 | 706 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 659 | 682 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 229 | 253 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 157 | 180 | 18.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 845 | 1123 | 6.0E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 611 | 635 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 302 | 326 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 205 | 9.1 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 845 | 1123 | 38.364635 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 851 | 873 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 965 | 977 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_011098750.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Sesamum indicum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UIT9 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Sesamum indicum OX=4182 GN=LOC105177329 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology