halophFGD

Basic Information

Locus ID: jg40185

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: Carbohydrate-binding protein of the ER

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr14	11780159	11783905	-	jg40185

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.26	31,212.85 Da	34.34	92.99	0.12

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	210	259	1.4E-5	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	203	258	1.48E-10	IPR011009
Gene3D	G3DSA:2.60.120.430	-	42	141	4.5E-7	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	178	274	1.0E-11	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G46290.1	hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.
RefSeq	XP_011099164.2	putative receptor-like protein kinase At5g39000 [Sesamum indicum]
Swiss-Prot	Q9LX66	Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1
TrEMBL	A0A2G9H0X4	Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16481 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for jg40185.