Basic Information
Locus ID:
jg40176
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 11726181 | 11728169 | + | jg40176 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 31,484.07 Da | 43.83 | 69.11 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 103 | 1.1E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 113 | 1.2E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 127 | 9.5E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 110 | 11.962324 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_012851784.1 | PREDICTED: receptor-like protein kinase FERONIA [Erythranthe guttata] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9IBQ3 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00044 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 12 | jg26190, jg27419, jg33699, jg39948, jg40172, jg40174 ... |
| Amaranthaceae | Atriplex hortensis | 1 | Ah029071 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl54771, Sgl60073, Sgl72325, Sgl76613 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000051255 |
| Apiaceae | Apium graveolens | 1 | Ag9G02308 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.568.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB05g034230.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0418 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10546 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023685 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_052093, gene-QYE76_060103 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G131900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG082610 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.30721.1, evm.TU.35434.1, evm.TU.40350.1 ... |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-2331, nbisL1-mrna-2391 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.454 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17773, nbisL1-mrna-21411 |
| Salicaceae | Populus euphratica | 2 | populus_peu25128, populus_peu25129 |
| Zosteraceae | Zostera marina | 1 | Zosma06g07960.v3.1 |