Basic Information
Locus ID:
jg40144
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 11485770 | 11490011 | + | jg40144 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 77,451.49 Da | 41.80 | 96.24 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 109 | 146 | 1.3E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 381 | 646 | 1.0E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 650 | 2.16E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 109 | 383 | 1.56E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 349 | 456 | 1.7E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 106 | 288 | 2.7E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 669 | 8.2E-62 | - |
| SMART | SM00220 | serkin_6 | 380 | 649 | 4.3E-32 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 198 | 221 | 7.280716 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 380 | 670 | 35.000744 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 386 | 408 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 499 | 511 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_011099082.1 | protein NSP-INTERACTING KINASE 1-like isoform X2 [Sesamum indicum] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UFZ1 | protein NSP-INTERACTING KINASE 1-like isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105177573 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology