Basic Information
Locus ID:
jg39448
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 951302 | 956663 | - | jg39448 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 14,334.32 Da | 55.01 | 73.70 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 63 | 9.94E-7 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 108 | 8.2E-8 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50860.2 | - | 0 |
| RefSeq | XP_011100191.1 | probable serine/threonine-protein kinase At1g54610 [Sesamum indicum] | 0 |
| F4I114 | Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=3702 GN=At1g09600 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2G9IAQ0 | Cyclin-dependent kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00380 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16965, jg39448 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.3358.V1.1 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.341 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011983 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20313 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18468 |