Basic Information
Locus ID:
jg38708
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 21620494 | 21625175 | + | jg38708 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 78,039.24 Da | 43.26 | 91.06 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 424 | 676 | 1.0E-20 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 96 | 154 | 8.0E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 2.5E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 422 | 676 | 8.37E-34 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 178 | 3.23E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 494 | 8.4E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 686 | 1.6E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 194 | 1.3E-43 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 680 | 14.732589 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 340 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011085985.1 | LOW QUALITY PROTEIN: protein MALE DISCOVERER 2 [Sesamum indicum] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TR07 | LOW QUALITY PROTEIN: protein MALE DISCOVERER 2 OS=Sesamum indicum OX=4182 GN=LOC105167850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology