halophFGD

Basic Information

Locus ID: jg38595

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: F-box protein At4g22030

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	20863723	20864982	-	jg38595

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.43	45,152.32 Da	39.77	95.06	-0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14476	Petal formation-expressed	85	396	8.2E-149	IPR027949
MobiDBLite	mobidb-lite	consensus disorder prediction	58	77	-	-
Coils	Coil	Coil	169	189	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT4G22030.1	F-box family protein with a domain of unknown function (DUF295).
RefSeq	XP_011096041.1	LOW QUALITY PROTEIN: probable F-box protein At4g22030 [Sesamum indicum]
Swiss-Prot	O65451	Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1
TrEMBL	A0A6I9UND4	LOW QUALITY PROTEIN: probable F-box protein At4g22030 OS=Sesamum indicum OX=4182 GN=LOC105175327 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg20436, jg21862, jg21863, jg24795, jg38595
Aizoaceae	Mesembryanthemum crystallinum	1	gene_77
Amaranthaceae	Atriplex hortensis	3	Ah017489, Ah017490, Ah017496
Amaranthaceae	Beta vulgaris	3	BVRB_8g185870, BVRB_8g185880, BVRB_8g185900
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg40180, Sbi_jg40181, Sbi_jg40191, Sbi_jg50158 ... Sbi_jg50159, Sbi_jg50164
Amaranthaceae	Salicornia europaea	3	Seu_jg1766, Seu_jg1767, Seu_jg1770
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00011351, GOSA_00011358, GOSA_00011360
Amaranthaceae	Suaeda glauca	5	Sgl46345, Sgl46346, Sgl46355, Sgl51063, Sgl51064
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000033600, gene:ENSEOMG00000046416
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.8AG0001490, CQ.Regalona.r1.8AG0001500 ... CQ.Regalona.r1.8BG0001390, CQ.Regalona.r1.8BG0001400, CQ.Regalona.r1.8BG0001420
Anacardiaceae	Pistacia vera	14	pistato.v30094850, pistato.v30094870, pistato.v30094880 ... pistato.v30094900, pistato.v30156400, pistato.v30156430, pistato.v30196920, pistato.v30196930, pistato.v30196940, pistato.v30196950, pistato.v30196970, pistato.v30196990, pistato.v30197000, pistato.v30197010
Apiaceae	Apium graveolens	6	Ag6G00886, Ag6G00887, Ag7G00590, Ag7G00591, Ag8G01071 ... Ag8G01072
Arecaceae	Cocos nucifera	5	COCNU_02G001650, contig69235210G000010 ... contig69235210G000020, scaffold014375G000040, scaffold076645G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103700463, gene-LOC103700599, gene-LOC103709619
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.2055.V1.1, AsparagusV1_01.2057.V1.1 ... AsparagusV1_06.999.V1.1
Asteraceae	Flaveria trinervia	2	Ftri18G26149, Ftri18G31499
Brassicaceae	Arabidopsis thaliana	2	AT4G04480.1, AT4G22030.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10026894m.g.v1.0, Thhalv10028702m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp6g04420.v2.2
Brassicaceae	Brassica nigra	3	BniB08g034470.2N, BniB08g037910.2N, BniB08g047920.2N
Casuarinaceae	Casuarina equisetifolia	9	Ceq01G1327, Ceq04G1626, Ceq04G1627, Ceq04G1628, Ceq04G1629 ... Ceq04G1630, Ceq04G1631, Ceq04G1632, Ceq05G0969
Casuarinaceae	Casuarina glauca	3	Cgl01G1482, Cgl04G1802, Cgl05G0968
Malvaceae	Hibiscus hamabo Siebold & Zucc.	10	nbisL1-mrna-1023, nbisL1-mrna-1024, nbisL1-mrna-3864 ... nbisL1-mrna-3865, nbisL1-mrna-3869, nbisL1-mrna-3870, nbisL1-mrna-3872, nbisL1-mrna-3873, nbisL1-mrna-8074, nbisL1-mrna-8075
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG12.1153, evm.TU.LG12.1154, evm.TU.LG12.1155 ... evm.TU.LG12.1156, evm.TU.LG12.1158, evm.TU.LG12.1159
Plantaginaceae	Plantago ovata	2	Pov_00005956, Pov_00005959
Plumbaginaceae	Limonium bicolor	1	Lb2G13972
Poaceae	Echinochloa crus-galli	7	AH01.2433, AH07.899, AH07.900, BH07.1024, BH07.1025 ... CH07.781, CH07.782
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_2AG0106760, gene-QOZ80_2AG0106770 ... gene-QOZ80_2BG0160290
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.6HG0557290.1.CDS1 ... HORVU.MOREX.r3.6HG0570020.1.CDS1, HORVU.MOREX.r3.7HG0651390.1.CDS1, HORVU.MOREX.r3.7HG0651400.1.CDS1
Poaceae	Lolium multiflorum	7	gene-QYE76_021742, gene-QYE76_021744, gene-QYE76_021746 ... gene-QYE76_021747, gene-QYE76_021749, gene-QYE76_034730, gene-QYE76_048715
Poaceae	Oryza coarctata	4	Oco03G005950, Oco03G005970, Oco04G006180, Oco04G006190
Poaceae	Oryza sativa	6	LOC_Os02g13190.1, LOC_Os02g13220.1, LOC_Os02g13260.1 ... LOC_Os02g28590.1, LOC_Os05g04570.1, LOC_Os12g01970.1
Poaceae	Paspalum vaginatum	2	gene-BS78_04G092200, gene-BS78_04G092300
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0605798, Pt_Chr0605799
Poaceae	Sporobolus alterniflorus	7	Chr01G026970, Chr06G032500, Chr0G010000, Chr0G010010 ... Chr11G010120, Chr15G023900, Chr15G023910
Poaceae	Thinopyrum elongatum	9	Tel6E01G244000, Tel6E01G244100, Tel6E01G244200 ... Tel6E01G311900, Tel7E01G212500, Tel7E01G212700, Tel7E01G212900, Tel7E01G213000, Tel7E01G213100
Poaceae	Triticum dicoccoides	9	gene_TRIDC6AG014460, gene_TRIDC6AG014470 ... gene_TRIDC6AG021060, gene_TRIDC6BG019890, gene_TRIDC6BG019920, gene_TRIDC6BG026900, gene_TRIDC7AG012330, gene_TRIDC7BG000690, gene_TRIDC7BG000700
Poaceae	Triticum aestivum	15	TraesCS4A02G403800.1.cds1, TraesCS6A02G110500.1.cds1 ... TraesCS6A02G110600.1.cds1, TraesCS6A02G151600.1.cds1, TraesCS6B02G138800.1.cds1, TraesCS6B02G138900.1.cds1, TraesCS6B02G179700.1.cds1, TraesCS6D02G099200.1.cds1, TraesCS6D02G099300.1.cds1, TraesCS6D02G141600.1.cds1, TraesCS7A02G105600.1.cds1, TraesCS7A02G105800.1.cds1, TraesCS7B02G004000.1.cds1, TraesCS7B02G004500.1.cds1, TraesCS7B02G004600.1.cds1
Poaceae	Zea mays	3	Zm00001eb205040_P001, Zm00001eb239750_P001 ... Zm00001eb239760_P001
Poaceae	Zoysia japonica	2	nbis-gene-34288, nbis-gene-34291
Poaceae	Zoysia macrostachya	2	Zma_g15453, Zma_g15454
Portulacaceae	Portulaca oleracea	7	evm.TU.LG01.1903, evm.TU.LG01.1904, evm.TU.LG01.1905 ... evm.TU.LG14.1090, evm.TU.LG14.1091, evm.TU.LG18.895, evm.TU.LG20.968
Posidoniaceae	Posidonia oceanica	1	gene.Posoc08g12050
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_12_RagTag.1013, evm.TU.Scaffold_13_RagTag.39 ... evm.TU.Scaffold_13_RagTag.41
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-23964, nbisL1-mrna-29781, nbisL1-mrna-29782 ... nbisL1-mrna-29784
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-5445, nbisL1-mrna-8179
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-20767, nbisL1-mrna-20769, nbisL1-mrna-21714
Rhizophoraceae	Kandelia candel	3	add.evm.TU.utg000015l.10, add.evm.TU.utg000015l.9 ... add.evm.TU.utg000027l.10
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-19176, nbisL1-mrna-19177, nbisL1-mrna-20986 ... nbisL1-mrna-22791, nbisL1-mrna-22792, nbisL1-mrna-23107
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-23287, nbisL1-mrna-23418, nbisL1-mrna-23420 ... nbisL1-mrna-23422
Salicaceae	Populus euphratica	8	populus_peu10370, populus_peu10371, populus_peu10372 ... populus_peu10374, populus_peu10375, populus_peu10376, populus_peu18466, populus_peu18467
Solanaceae	Lycium barbarum	9	gene-LOC132622546, gene-LOC132622640, gene-LOC132622797 ... gene-LOC132622798, gene-LOC132622862, gene-LOC132623023, gene-LOC132623025, gene-LOC132623068, gene-LOC132623400
Solanaceae	Solanum chilense	3	SOLCI005821200, SOLCI005821300, SOLCI005821400
Solanaceae	Solanum pennellii	3	gene-LOC107010110, gene-LOC107010799, gene-LOC107010883
Tamaricaceae	Reaumuria soongarica	6	gene_409, gene_410, gene_411, gene_412, gene_413, gene_414
Tamaricaceae	Tamarix chinensis	2	TC08G0098, TC08G0099
Zosteraceae	Zostera marina	1	Zosma01g22770.v3.1