Basic Information
Locus ID:
jg38586
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20790837 | 20796001 | - | jg38586 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 85,285.52 Da | 34.18 | 93.89 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 160 | 179 | 0.86 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 475 | 746 | 8.9E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 94 | 132 | 1.9E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 451 | 746 | 1.11E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 109 | 303 | 2.72E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 435 | 548 | 2.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 772 | 1.8E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 92 | 319 | 1.6E-42 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 160 | 182 | 7.180607 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 471 | 749 | 33.884159 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 434 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_012841971.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 [Erythranthe guttata] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A022R4X9 | Protein kinase domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002066mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology