Basic Information
Locus ID:
jg38512
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20330875 | 20340136 | - | jg38512 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 146,426.70 Da | 46.84 | 75.46 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 277 | 373 | 4.45904E-43 | - |
| CDD | cd13999 | STKc_MAP3K-like | 1045 | 1302 | 1.37835E-111 | - |
| Pfam | PF00564 | PB1 domain | 289 | 374 | 3.9E-19 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1041 | 1302 | 6.1E-63 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 290 | 380 | 2.75E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1035 | 1301 | 1.91E-77 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 292 | 374 | 4.5E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1127 | 1314 | 1.8E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1033 | 1126 | 6.8E-25 | - |
| SMART | SM00220 | serkin_6 | 1039 | 1305 | 1.6E-60 | IPR000719 |
| SMART | SM00666 | PB1_new | 288 | 375 | 6.6E-31 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1039 | 1304 | 41.601322 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1045 | 1070 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1164 | 1176 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1273 | 1295 | 2.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1121 | 1134 | 2.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1158 | 1176 | 2.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1229 | 1251 | 2.2E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 799 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 562 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011086337.1 | uncharacterized protein LOC105168100 isoform X1 [Sesamum indicum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GI27 | Tyrosine kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22527 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology