Basic Information
Locus ID:
jg38459
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 19928227 | 19929555 | + | jg38459 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 47,581.49 Da | 43.02 | 75.61 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 91 | 435 | 6.97049E-90 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 92 | 260 | 2.5E-57 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 282 | 430 | 5.1E-30 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 86 | 436 | 2.07E-93 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 68 | 258 | 1.1E-54 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 259 | 439 | 2.8E-47 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 92 | 431 | 46.890614 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 315 | 326 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_011082275.1 | aspartic proteinase CDR1-like [Sesamum indicum] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9TEL6 | aspartic proteinase CDR1-like OS=Sesamum indicum OX=4182 GN=LOC105165099 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology