Basic Information
Locus ID:
jg38350
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 19129470 | 19131537 | - | jg38350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 22,970.07 Da | 41.88 | 70.24 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08276 | PAN-like domain | 128 | 146 | 2.4E-4 | IPR003609 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 155 | 210 | 8.2E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049412561.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Solanum stenotomum] | 0 |
| TrEMBL | A0A2Z7CER6 | Receptor-like serine/threonine-protein kinase OS=Dorcoceras hygrometricum OX=472368 GN=F511_07965 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg38350 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000043383 |
| Asteraceae | Flaveria trinervia | 1 | Ftri13G02016 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11762 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G638900 |