Basic Information
Locus ID:
jg38117
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13417078 | 13419901 | + | jg38117 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 80,856.36 Da | 47.20 | 85.27 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 64 | 1.7E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 325 | 362 | 0.0011 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 560 | 667 | 7.6E-7 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 390 | 443 | 2.1E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 446 | 3.66E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 553 | 687 | 2.38E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 526 | 688 | 3.1E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 326 | 450 | 5.1E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 320 | 3.1E-76 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 90 | 112 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 388 | 412 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 210 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 309 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 113 | 136 | 0.035 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 367 | 676 | 9.799822 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 414 | 436 | 7.665751 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 542 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_020552442.1 | receptor-like kinase TMK4 [Sesamum indicum] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8M8V1A8 | receptor-like kinase TMK4 OS=Sesamum indicum OX=4182 GN=LOC105170540 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology