Basic Information
Locus ID:
jg3808
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7557077 | 7573710 | + | jg3808 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 52,449.88 Da | 50.88 | 97.47 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 201 | 443 | 6.2E-11 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 148 | 201 | 2.43E-6 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 320 | 1.2E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 331 | 457 | 2.4E-7 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 407 | 423 | 7.9E-6 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 183 | 198 | 7.9E-6 | - |
| Coils | Coil | Coil | 46 | 73 | - | - |
| Coils | Coil | Coil | 159 | 179 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12280.1 | LRR and NB-ARC domains-containing disease resistance protein. | 0 |
| RefSeq | XP_051138551.1 | probable disease resistance protein At4g27220 [Andrographis paniculata] | 0 |
| P60838 | Disease resistance protein SUMM2 OS=Arabidopsis thaliana OX=3702 GN=SUMM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J7GKF9 | NB-ARC domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_022317 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology