Basic Information
Locus ID:
jg38070
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12783072 | 12783701 | + | jg38070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 13,967.80 Da | 42.88 | 78.77 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 98 | 1.55E-6 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 89 | 7.0E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 108 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020552474.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Sesamum indicum] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8M8V832 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 OS=Sesamum indicum OX=4182 GN=LOC105170475 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg16731, jg3143, jg38070 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg2111 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G004820 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9471 |
| Poaceae | Oryza coarctata | 1 | Oco09G012410 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG087690 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5703 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4640 |
| Zosteraceae | Zostera marina | 1 | Zosma02g17350.v3.1 |